PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_D12G1111
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 374aa    MW: 40154.7 Da    PI: 9.2471
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_D12G1111genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_173.23.8e-23255317163
                  XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                  e+elkrerrkq+NRe+ArrsR+RK+ae+eeL++kv++L+aeN++L++e+++l+++++kl+ e+
  Gh_D12G1111 255 ERELKRERRKQSNRESARRSRLRKQAETEELARKVEALTAENTTLRSEINQLTEKSEKLRLEN 317
                  89*********************************************************9887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077776.7E-34194IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165963.0E-19123239No hitNo description
Gene3DG3DSA:1.20.5.1701.8E-18249314No hitNo description
PfamPF001701.5E-21255317IPR004827Basic-leucine zipper domain
SMARTSM003382.5E-22255319IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.725257320IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.38E-11258314No hitNo description
CDDcd147021.88E-22260309No hitNo description
PROSITE patternPS000360262277IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    Send to blast
MGSSDEGKSS KSDKSSSPAP PDQTNIHVYP DWAAMQAYYG PRVPMPPYYN SAVASGHAPS  60
PYMWGPTQAI MPPYGTTYAT IYPHGGVYVH PTVPMGSHGH GVPSSPKAAP ETPTKFSGNT  120
NGGLMKKLKG FDGLAMSIGN STAENAESGA EPRPSLSAET EGSTDDSDGN TTGADQTRRK  180
RSREGTPAIG VEGNNEARSK PVAALEATAT ISPKPVGSVL PSGMTTSLEL SNPPAKSSPT  240
NVPRVMTSEI WLQNERELKR ERRKQSNRES ARRSRLRKQA ETEELARKVE ALTAENTTLR  300
SEINQLTEKS EKLRLENATL VEGLKNGELG YAKDIIMNKK ADKEGEMYEK KSNSGAKLHQ  360
LFDPSPRADA VAAS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1271277RRSRLRK
2271278RRSRLRKQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012437735.10.0PREDICTED: G-box-binding factor 3-like isoform X2
SwissprotP427761e-123GBF3_ARATH; G-box-binding factor 3
TrEMBLA0A0D2PTN50.0A0A0D2PTN5_G
STRINGGLYMA03G41590.51e-152(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM35712661
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.11e-120G-box binding factor 3